EnhancerDB
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  3. rs73803612[chr5:172202878]
Enhancers that have rs73803612[chr5:172202878]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172202171 172203025 vista50166
VISTA
Transcript factors that have rs73803612[chr5:172202878]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172202315 172202943 POLR2A UCSC Txn Factor no Conserved 108537489
chr5 172202867 172202888 IRF1 JASPAR yes 67824923
chr5 172202867 172202888 IRF1 JASPAR yes 70762997
chr5 172202869 172202884 PRDM1 JASPAR yes 67824925
chr5 172202869 172202884 PRDM1 JASPAR yes 70762999
chr5 172202869 172202890 ZNF263 JASPAR yes 67824926
chr5 172202869 172202890 ZNF263 JASPAR yes 70763000
chr5 172202876 172202880 YY1 TRANSFAC yes 67824927
chr5 172202876 172202880 YY1 TRANSFAC yes 70763001
Genes associated with rs73803612[chr5:172202878], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More