EnhancerDB
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  3. rs73999170[chr2:238523087]
Enhancers that have rs73999170[chr2:238523087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238519874 238529599 enh19399
Liver (HepG2) Brain (SK-N-SH) Large Intestine Lung (PC-9) Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Thymus Heart
chr2 238522379 238526567 vista1020
VISTA
chr2 238522988 238523293 vista35417
VISTA
Transcript factors that have rs73999170[chr2:238523087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238522872 238523233 TEAD4 UCSC Txn Factor no Conserved 107690853
chr2 238522872 238523233 TEAD4 UCSC Txn Factor no Conserved 108435930
chr2 238522917 238523186 RXRA UCSC Txn Factor no Conserved 107690854
chr2 238522917 238523186 RXRA UCSC Txn Factor no Conserved 108435931
chr2 238522948 238523238 FOXA1 UCSC Txn Factor no Conserved 107690855
chr2 238522948 238523238 FOXA1 UCSC Txn Factor no Conserved 108435932
chr2 238523005 238523470 CTCF UCSC Txn Factor no Conserved 107690856
chr2 238523005 238523470 CTCF UCSC Txn Factor no Conserved 108435933
chr2 238523062 238523341 RAD21 UCSC Txn Factor no Conserved 107690857
chr2 238523062 238523341 RAD21 UCSC Txn Factor no Conserved 108435934
chr2 238523080 238523094 TCF7L2 JASPAR yes 22241966
chr2 238523080 238523094 TCF7L2 JASPAR yes 68303039
chr2 238523080 238523094 TCF7L2 JASPAR yes 82124564
Genes associated with rs73999170[chr2:238523087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More