EnhancerDB
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  3. rs74000542[chr2:240166438]
Enhancers that have rs74000542[chr2:240166438]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs74000542[chr2:240166438]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240166429 240166439 ID4 JASPAR yes 82220376
chr2 240166429 240166439 TCF3 JASPAR yes 82220377
chr2 240166429 240166439 TCF4 JASPAR yes 82220378
chr2 240166429 240166440 NRF1 JASPAR yes 82220379
chr2 240166430 240166439 SNAI2 JASPAR yes 82220380
Genes associated with rs74000542[chr2:240166438], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More