EnhancerDB
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  3. rs74003270[chr16:4338629]
Enhancers that have rs74003270[chr16:4338629]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs74003270[chr16:4338629]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4335970 4340905 TCF7L2 GTRD no Colon (HCT116) 21686304
chr16 4336163 4339441 TCF7L2 GTRD no Colon (HCT116) 21686305
chr16 4336332 4339430 ZNF143 GTRD no Epithelial (MCF-7) 21686308
chr16 4336343 4339415 TCF7L2 GTRD no Colon (HCT116) 21686309
chr16 4336589 4339442 TCF7L2 GTRD no Colon (HCT116) 21686312
chr16 4337135 4338736 ZNF143 GTRD no Epithelial (MCF-7) 21686314
chr16 4337733 4339419 TCF7L2 GTRD no Colon (HCT116) 21686325
chr16 4337776 4339093 ZBTB33 GTRD no Brain (SK-N-SH) 21686326
chr16 4337803 4338986 ZNF143 GTRD no Epithelial (MCF-7) 21686327
chr16 4337808 4339299 ZNF143 GTRD no Epithelial (MCF-7) 21686328
chr16 4337978 4338974 ZNF143 GTRD no Epithelial (MCF-7) 21686330
chr16 4338074 4338737 TCF7L2 GTRD no Colon (HCT116) 21686331
chr16 4338124 4339098 ZNF143 GTRD no Epithelial (MCF-7) 21686332
chr16 4338197 4338801 ZNF274 GTRD no Cervix (HeLa-S3) 21686333
chr16 4338252 4338708 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686334
chr16 4338296 4338846 TCF7L2 GTRD no Colon (HCT116) 21686337
chr16 4338304 4338653 ZNF274 GTRD no Cervix (HeLa-S3) 21686338
chr16 4338305 4338698 ZNF143 GTRD no Epithelial (MCF-7) 21686339
chr16 4338322 4338798 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686340
chr16 4338369 4338833 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686342
chr16 4338374 4338750 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21686343
chr16 4338385 4338785 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686344
chr16 4338397 4338773 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686345
chr16 4338408 4338798 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686346
chr16 4338408 4339058 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686347
chr16 4338414 4338730 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686348
chr16 4338442 4338752 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21686349
chr16 4338443 4338713 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686350
chr16 4338451 4338711 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686352
chr16 4338459 4338693 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21686353
chr16 4338467 4338694 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21686354
chr16 4338472 4338702 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686355
chr16 4338475 4338671 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686356
chr16 4338482 4338665 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686358
chr16 4338487 4338690 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686359
chr16 4338491 4338711 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686360
chr16 4338609 4339433 ZNF143 GTRD no Epithelial (MCF-7) 21686361
chr16 4338613 4339426 ZNF143 GTRD no Epithelial (MCF-7) 21686362
chr16 4338616 4339634 ZNF143 GTRD no Epithelial (MCF-7) 21686363
chr16 4338625 4338640 ZIC3 JASPAR yes 9266882
chr16 4338626 4338644 ESR1 JASPAR yes 9266883
chr16 4338629 4338634 SP1 TRANSFAC yes 9266884
Genes associated with rs74003270[chr16:4338629], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More