EnhancerDB
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  3. rs74033398[chr16:88827906]
Enhancers that have rs74033398[chr16:88827906]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs74033398[chr16:88827906]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 21736871
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 108223302
chr16 88825532 88829851 POLR2A UCSC Txn Factor no Conserved 108223304
chr16 88827644 88830105 ZNF143 GTRD no Epithelial (MCF-7) 21736891
chr16 88827644 88830105 ZNF143 GTRD no Epithelial (MCF-7) 108223325
chr16 88827897 88827908 ELK4 JASPAR yes 12301049
chr16 88827898 88827908 ELK1 JASPAR yes 12301050
chr16 88827898 88827908 ELK3 JASPAR yes 12301051
chr16 88827898 88827908 ERF JASPAR yes 12301052
chr16 88827898 88827908 ERG JASPAR yes 12301053
chr16 88827898 88827908 ETV1 JASPAR yes 12301054
chr16 88827898 88827908 ETV4 JASPAR yes 12301055
chr16 88827898 88827908 ETV5 JASPAR yes 12301056
chr16 88827898 88827908 FEV JASPAR yes 12301057
chr16 88827898 88827908 FLI1 JASPAR yes 12301058
chr16 88827898 88827908 GABPA JASPAR yes 12301059
chr16 88827900 88827906 ETS1 JASPAR yes 12301060
chr16 88827900 88827906 SPI1 JASPAR yes 12301061
chr16 88827900 88827910 ELK1 JASPAR yes 12301062
chr16 88827905 88827909 H4TF2 TRANSFAC yes 12301063
Genes associated with rs74033398[chr16:88827906], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More