EnhancerDB
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  3. rs74060949[chr1:27977007]
Enhancers that have rs74060949[chr1:27977007]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 27976905 27977430 vista945
VISTA
Transcript factors that have rs74060949[chr1:27977007]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27976757 27977233 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107802610
chr1 27976992 27977009 BCL6B JASPAR yes 27718240
chr1 27976992 27977009 BCL6B JASPAR yes 118259891
chr1 27976993 27977008 STAT1 JASPAR yes 27718241
chr1 27976993 27977008 STAT1 JASPAR yes 118259892
chr1 27977003 27977017 EBF1 JASPAR yes 27718244
chr1 27977003 27977017 EBF1 JASPAR yes 118259895
chr1 27977004 27977016 TFAP2C JASPAR yes 27718245
chr1 27977004 27977016 TFAP2C JASPAR yes 118259896
chr1 27977005 27977014 TFAP2A JASPAR yes 27718246
chr1 27977005 27977014 TFAP2A JASPAR yes 118259897
Genes associated with rs74060949[chr1:27977007], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More