EnhancerDB
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  3. rs74071648[chr1:54804887]
Enhancers that have rs74071648[chr1:54804887]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54786534 54810675 enh369
Brain (SK-N-SH) Prostate (RWPE1) Stomach Muscle (A673) Uterus Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9) Heart
chr1 54804829 54805209 vista1650
VISTA
Transcript factors that have rs74071648[chr1:54804887]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54803384 54804961 ZNF274 GTRD no Bone Marrow (K562) 107804778
chr1 54803527 54805269 ZNF274 GTRD no Cervix (HeLa-S3) 107804779
chr1 54803538 54805442 TCF7L2 GTRD no Colon (HCT116) 107804780
chr1 54803717 54805478 ZNF274 GTRD no Cervix (HeLa-S3) 107804781
chr1 54804289 54805092 ZNF143 GTRD no Epithelial (MCF-7) 107804782
chr1 54804317 54805007 ZNF274 GTRD no Cervix (HeLa-S3) 107804783
chr1 54804353 54805036 ZNF143 GTRD no Epithelial (MCF-7) 107804784
chr1 54804398 54805044 ZNF143 GTRD no Epithelial (MCF-7) 107804785
chr1 54804449 54805084 ZNF274 GTRD no Cervix (HeLa-S3) 107804786
chr1 54804455 54805083 ZNF274 GTRD no Cervix (HeLa-S3) 107804787
chr1 54804876 54805205 ZNF274 GTRD no Blood (GM12878) 107804788
chr1 54804877 54804891 GATA2 JASPAR yes 28975219
chr1 54804877 54804891 GATA2 JASPAR yes 118292511
chr1 54804881 54804889 GATA3 JASPAR yes 28975220
chr1 54804881 54804889 GATA5 JASPAR yes 28975221
chr1 54804881 54804889 GATA3 JASPAR yes 118292512
chr1 54804881 54804889 GATA5 JASPAR yes 118292513
Genes associated with rs74071648[chr1:54804887], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More