EnhancerDB
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  3. rs74139717[chr1:226845449]
Enhancers that have rs74139717[chr1:226845449]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs74139717[chr1:226845449]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226845440 226845453 SCRT2 JASPAR yes 35828652
chr1 226845444 226845455 ESRRA JASPAR yes 35828653
chr1 226845444 226845457 NR2F1 JASPAR yes 35828654
chr1 226845446 226845454 NR4A2 JASPAR yes 35828655
chr1 226845447 226845462 ESR2 JASPAR yes 35828656
chr1 226845447 226845464 RXRA JASPAR yes 35828657
chr1 226845448 226845452 ESR1 TRANSFAC yes 35828658
Genes associated with rs74139717[chr1:226845449], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More