EnhancerDB
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  3. rs74140220[chr1:205265383]
Enhancers that have rs74140220[chr1:205265383]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205259785 205270135 enh12589
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 205265235 205265548 vista4732
VISTA
Transcript factors that have rs74140220[chr1:205265383]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205264867 205265483 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861707
chr1 205264937 205265437 ZNF274 GTRD no Blood (GM12878) 107861708
chr1 205265369 205265384 FOXP1 JASPAR yes 34752802
chr1 205265369 205265384 FOXP1 JASPAR yes 118440417
chr1 205265377 205265392 SOX21 JASPAR yes 34752803
chr1 205265377 205265392 SOX21 JASPAR yes 118440418
Genes associated with rs74140220[chr1:205265383], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More