EnhancerDB
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  3. rs74430961[chr1:110328746]
Enhancers that have rs74430961[chr1:110328746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110323180 110341767 enh12126
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs74430961[chr1:110328746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110327966 110329312 ZNF274 GTRD no Bone Marrow (K562) 21327123
chr1 110327986 110329055 ZNF274 GTRD no Bone Marrow (K562) 21327124
chr1 110327999 110329279 ZNF274 GTRD no Bone Marrow (K562) 21327125
chr1 110328003 110328831 ZNF274 GTRD no Cervix (HeLa-S3) 21327126
chr1 110328006 110328941 ZNF274 GTRD no Bone Marrow (K562) 21327127
chr1 110328024 110328807 ZNF274 GTRD no Bone Marrow (K562) 21327128
chr1 110328051 110329237 ZNF274 GTRD no Bone Marrow (K562) 21327130
chr1 110328132 110328933 ZNF274 GTRD no Bone Marrow (K562) 21327131
chr1 110328154 110328810 ZNF274 GTRD no Bone Marrow (K562) 21327134
chr1 110328159 110328817 ZNF274 GTRD no Bone Marrow (K562) 21327135
chr1 110328396 110329204 ZNF274 GTRD no Bone Marrow (K562) 21327141
chr1 110328564 110329245 ZNF274 GTRD no Bone Marrow (K562) 21327142
chr1 110328746 110328750 LFA1 TRANSFAC yes 31438120
Genes associated with rs74430961[chr1:110328746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 110881128 110889299 + RBM15 ENSG00000162775.10 110881128 552382 Heart 0.289351 998