EnhancerDB
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  3. rs74517577[chr16:11395954]
Enhancers that have rs74517577[chr16:11395954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11382725 11409295 enh3884
Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs74517577[chr16:11395954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11395414 11397435 ZNF143 GTRD no Epithelial (MCF-7) 21690398
chr16 11395414 11397435 ZNF143 GTRD no Epithelial (MCF-7) 108181233
chr16 11395889 11397458 ZNF274 GTRD no Liver (HepG2) 21690399
chr16 11395889 11397458 ZNF274 GTRD no Liver (HepG2) 108181234
chr16 11395948 11395957 SRY JASPAR yes 9503381
chr16 11395950 11395959 SOX9 JASPAR yes 9503382
chr16 11395951 11395966 SOX21 JASPAR yes 9503383
Genes associated with rs74517577[chr16:11395954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More