EnhancerDB
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  3. rs74569406[chr12:116977498]
Enhancers that have rs74569406[chr12:116977498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs74569406[chr12:116977498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116977438 116978345 ZNF274 GTRD no Blood (GM12878) 21577350
chr12 116977438 116978345 ZNF274 GTRD no Blood (GM12878) 108061769
chr12 116977491 116978438 ZNF274 GTRD no Blood (GM12878) 21577351
chr12 116977491 116978438 ZNF274 GTRD no Blood (GM12878) 108061770
chr12 116977493 116977505 PKNOX1 JASPAR yes 124008924
chr12 116977493 116977505 PKNOX2 JASPAR yes 124008925
chr12 116977493 116977505 TGIF1 JASPAR yes 124008926
chr12 116977493 116977505 TGIF2 JASPAR yes 124008927
chr12 116977496 116977507 DMRT3 JASPAR yes 124008928
Genes associated with rs74569406[chr12:116977498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More