EnhancerDB
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  3. rs74686082[chr12:52519780]
Enhancers that have rs74686082[chr12:52519780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs74686082[chr12:52519780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52518275 52519891 AR GTRD no Prostate (PC-3) 21546230
chr12 52519065 52523398 P63 GTRD no Skin (Keratinocyte) 21546231
chr12 52519499 52523414 P63 GTRD no Skin (Keratinocyte) 21546243
chr12 52519705 52520959 ZNF143 GTRD no Epithelial (MCF-7) 21546244
chr12 52519737 52520933 ZNF143 GTRD no Epithelial (MCF-7) 21546245
chr12 52519770 52519784 PLAG1 JASPAR yes 120919511
chr12 52519772 52519784 TFAP2A JASPAR yes 120919512
chr12 52519772 52519784 TFAP2B JASPAR yes 120919513
chr12 52519772 52519784 TFAP2C JASPAR yes 120919514
chr12 52519772 52519787 TFAP2A JASPAR yes 120919515
chr12 52519772 52519787 TFAP2C JASPAR yes 120919516
chr12 52519773 52519782 TFAP2A JASPAR yes 120919517
chr12 52519773 52519784 EBF1 JASPAR yes 120919518
chr12 52519780 52519785 ETS2 TRANSFAC yes 120919519
Genes associated with rs74686082[chr12:52519780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More