EnhancerDB
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  3. rs749256953[chr17:788912]
Enhancers that have rs749256953[chr17:788912]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 769365 796155 enh4193
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs749256953[chr17:788912]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 788906 788927 IRF1 JASPAR yes 52636948
chr17 788908 788923 PRDM1 JASPAR yes 52636949
chr17 788908 788923 STAT2 JASPAR yes 52636950
chr17 788908 788929 IRF1 JASPAR yes 52636951
chr17 788909 788930 IRF1 JASPAR yes 52636952
chr17 788910 788931 IRF1 JASPAR yes 52636953
chr17 788911 788926 FOXP1 JASPAR yes 52636954
chr17 788911 788932 IRF1 JASPAR yes 52636955
chr17 788912 788927 FOXP1 JASPAR yes 52636956
chr17 788912 788933 IRF1 JASPAR yes 52636957
Genes associated with rs749256953[chr17:788912], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More