EnhancerDB
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  3. rs75180539[chr16:85223877]
Enhancers that have rs75180539[chr16:85223877]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs75180539[chr16:85223877]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85222935 85229799 ZNF274 GTRD no Blood (GM12878) 21720680
chr16 85223371 85224793 ZNF274 GTRD no Blood (GM12878) 21720682
chr16 85223400 85229241 ZNF274 GTRD no Blood (GM12878) 21720683
chr16 85223598 85224616 ZNF274 GTRD no Blood (GM12878) 21720684
chr16 85223625 85224830 ZNF274 GTRD no Blood (GM12878) 21720685
chr16 85223697 85224461 ZNF274 GTRD no Blood (GM12878) 21720686
chr16 85223724 85224785 ZNF274 GTRD no Blood (GM12878) 21720687
chr16 85223728 85224541 ZNF274 GTRD no Blood (GM12878) 21720688
chr16 85223758 85224608 ZNF274 GTRD no Blood (GM12878) 21720689
chr16 85223782 85224748 ZNF274 GTRD no Blood (GM12878) 21720690
chr16 85223795 85224735 ZNF274 GTRD no Blood (GM12878) 21720691
chr16 85223798 85224827 ZNF274 GTRD no Blood (GM12878) 21720692
chr16 85223801 85224536 ZNF274 GTRD no Blood (GM12878) 21720693
chr16 85223805 85224435 ZNF274 GTRD no Blood (GM12878) 21720694
chr16 85223819 85224596 ZNF274 GTRD no Blood (GM12878) 21720695
chr16 85223830 85224666 ZNF274 GTRD no Blood (GM12878) 21720696
chr16 85223868 85223883 IRF9 JASPAR yes 12030355
chr16 85223869 85223883 IRF7 JASPAR yes 12030356
chr16 85223869 85223883 IRF8 JASPAR yes 12030357
Genes associated with rs75180539[chr16:85223877], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More