EnhancerDB
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  3. rs7530281[chr1:234858895]
Enhancers that have rs7530281[chr1:234858895]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234827105 234875936 enh12795
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 234858843 234859287 vista5631
VISTA
Transcript factors that have rs7530281[chr1:234858895]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234858437 234859434 P63 GTRD no Skin (Keratinocyte) 21396405
chr1 234858437 234859434 P63 GTRD no Skin (Keratinocyte) 107881596
chr1 234858459 234859443 P63 GTRD no Skin (Keratinocyte) 21396406
chr1 234858459 234859443 P63 GTRD no Skin (Keratinocyte) 107881597
chr1 234858491 234859559 P63 GTRD no Skin (Keratinocyte) 21396407
chr1 234858491 234859559 P63 GTRD no Skin (Keratinocyte) 107881598
chr1 234858505 234859432 P63 GTRD no Skin (Keratinocyte) 21396408
chr1 234858505 234859432 P63 GTRD no Skin (Keratinocyte) 107881599
chr1 234858649 234861065 POLR2A UCSC Txn Factor no Conserved 107881600
chr1 234858783 234859098 TCF7L2 GTRD no Colon (HCT116) 107881601
chr1 234858845 234859241 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21396409
chr1 234858845 234859241 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881602
chr1 234858871 234859227 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21396410
chr1 234858871 234859227 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881603
chr1 234858883 234858895 MEF2A JASPAR yes 36307470
chr1 234858883 234858895 MEF2D JASPAR yes 36307471
chr1 234858883 234858895 MEF2A JASPAR yes 118484474
chr1 234858883 234858895 MEF2D JASPAR yes 118484475
Genes associated with rs7530281[chr1:234858895], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 234040679 234460262 + SLC35F3 ENSG00000183780.8 234040679 398633 Uterus 0.396682 1961