EnhancerDB
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  3. rs7533673[chr1:171391654]
Enhancers that have rs7533673[chr1:171391654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs7533673[chr1:171391654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171391645 171391657 TAL1 JASPAR yes 33078741
chr1 171391646 171391658 BHLHE23 JASPAR yes 33078743
chr1 171391647 171391657 BHLHE22 JASPAR yes 33078744
chr1 171391647 171391657 NEUROD2 JASPAR yes 33078745
chr1 171391647 171391657 NEUROG2 JASPAR yes 33078746
chr1 171391647 171391657 OLIG1 JASPAR yes 33078747
chr1 171391647 171391657 OLIG2 JASPAR yes 33078748
chr1 171391647 171391657 OLIG3 JASPAR yes 33078749
chr1 171391647 171391659 TAL1 JASPAR yes 33078750
Genes associated with rs7533673[chr1:171391654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More