EnhancerDB
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  3. rs7538209[chr1:173378347]
Enhancers that have rs7538209[chr1:173378347]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs7538209[chr1:173378347]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173378341 173378351 RORA JASPAR yes 33196499
chr1 173378342 173378353 ESRRA JASPAR yes 33196500
chr1 173378342 173378353 ESRRB JASPAR yes 33196501
chr1 173378346 173378350 ESR1 TRANSFAC yes 33196502
Genes associated with rs7538209[chr1:173378347], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More