EnhancerDB
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  3. rs7538300[chr1:39652764]
Enhancers that have rs7538300[chr1:39652764]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs7538300[chr1:39652764]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39652749 39652770 IRF1 JASPAR yes 28264286
chr1 39652751 39652766 PRDM1 JASPAR yes 28264287
chr1 39652751 39652766 STAT2 JASPAR yes 28264288
chr1 39652752 39652766 STAT1 JASPAR yes 28264289
chr1 39652753 39652774 ZNF263 JASPAR yes 28264290
chr1 39652754 39652775 ZNF263 JASPAR yes 28264291
chr1 39652756 39652777 ZNF263 JASPAR yes 28264292
chr1 39652758 39652772 SPI1 JASPAR yes 28264293
chr1 39652761 39652771 MZF1 JASPAR yes 28264294
Genes associated with rs7538300[chr1:39652764], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More