EnhancerDB
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  3. rs7538559[chr1:173372827]
Enhancers that have rs7538559[chr1:173372827]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs7538559[chr1:173372827]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173372814 173372831 RXRA JASPAR yes 33195491
chr1 173372822 173372835 NR2F1 JASPAR yes 33195493
chr1 173372824 173372842 RARA JASPAR yes 33195494
chr1 173372826 173372830 ESR1 TRANSFAC yes 33195495
Genes associated with rs7538559[chr1:173372827], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More