EnhancerDB
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  3. rs75395395[chr5:172314017]
Enhancers that have rs75395395[chr5:172314017]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 172313877 172314602 vista50192
VISTA
Transcript factors that have rs75395395[chr5:172314017]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172313976 172314396 MYC UCSC Txn Factor no Conserved 108537528
chr5 172314011 172314022 E2F1 JASPAR yes 67839595
chr5 172314011 172314022 E2F1 JASPAR yes 70764562
chr5 172314012 172314017 SP1 TRANSFAC yes 67839596
chr5 172314012 172314017 SP1 TRANSFAC yes 70764563
chr5 172314015 172314030 PRDM1 JASPAR yes 67839597
chr5 172314015 172314030 PRDM1 JASPAR yes 70764564
Genes associated with rs75395395[chr5:172314017], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More