EnhancerDB
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  3. rs7540289[chr1:16020782]
Enhancers that have rs7540289[chr1:16020782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16015949 16039390 enh77
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7540289[chr1:16020782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16020763 16020782 CTCF JASPAR yes 26994878
chr1 16020775 16020793 ESR1 JASPAR yes 26994879
chr1 16020776 16020793 ESR1 JASPAR yes 26994880
chr1 16020776 16020794 ESR2 JASPAR yes 26994881
chr1 16020780 16020794 TLX1 JASPAR yes 26994882
Genes associated with rs7540289[chr1:16020782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More