EnhancerDB
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  3. rs7542001[chr1:8251938]
Enhancers that have rs7542001[chr1:8251938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8240061 8281055 enh11465
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7542001[chr1:8251938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8251933 8251948 TFAP2C JASPAR yes 26525462
chr1 8251936 8251947 TFAP2A JASPAR yes 26525463
chr1 8251936 8251947 TFAP2B JASPAR yes 26525464
chr1 8251936 8251947 TFAP2C JASPAR yes 26525465
chr1 8251937 8251946 TFAP2A JASPAR yes 26525466
Genes associated with rs7542001[chr1:8251938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More