EnhancerDB
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  3. rs754229682[chr1:25100082]
Enhancers that have rs754229682[chr1:25100082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs754229682[chr1:25100082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25100076 25100097 IRF1 JASPAR yes 27530190
chr1 25100078 25100099 IRF1 JASPAR yes 27530191
chr1 25100079 25100100 IRF1 JASPAR yes 27530192
chr1 25100080 25100095 FOXP1 JASPAR yes 27530193
chr1 25100080 25100101 IRF1 JASPAR yes 27530194
chr1 25100081 25100096 FOXP1 JASPAR yes 27530195
chr1 25100081 25100102 IRF1 JASPAR yes 27530196
chr1 25100082 25100097 FOXP1 JASPAR yes 27530197
chr1 25100082 25100103 IRF1 JASPAR yes 27530198
Genes associated with rs754229682[chr1:25100082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More