EnhancerDB
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  3. rs754666[chr1:230250182]
Enhancers that have rs754666[chr1:230250182]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs754666[chr1:230250182]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230249314 230250364 STAT3 UCSC Txn Factor no Conserved 107878671
chr1 230249541 230250242 ZNF274 GTRD no Blood (GM12878) 21391473
chr1 230249541 230250242 ZNF274 GTRD no Blood (GM12878) 107878693
chr1 230249569 230250245 ZNF274 GTRD no Blood (GM12878) 21391475
chr1 230249569 230250245 ZNF274 GTRD no Blood (GM12878) 107878695
chr1 230250182 230250186 LFA1 TRANSFAC yes 36022233
Genes associated with rs754666[chr1:230250182], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More