EnhancerDB
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  3. rs7546960[chr1:235118260]
Enhancers that have rs7546960[chr1:235118260]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7546960[chr1:235118260]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235117967 235118689 ZNF274 GTRD no Blood (GM12878) 21402599
chr1 235118106 235118498 ZNF274 GTRD no Liver (HepG2) 21402600
chr1 235118257 235118269 BHLHE23 JASPAR yes 36338070
Genes associated with rs7546960[chr1:235118260], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More