EnhancerDB
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  3. rs75475847[chr16:88826905]
Enhancers that have rs75475847[chr16:88826905]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs75475847[chr16:88826905]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88823154 88827493 TCF7L2 GTRD no Colon (HCT116) 21736869
chr16 88823154 88827493 TCF7L2 GTRD no Colon (HCT116) 108223300
chr16 88823627 88827542 TCF7L2 GTRD no Colon (HCT116) 21736870
chr16 88823627 88827542 TCF7L2 GTRD no Colon (HCT116) 108223301
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 21736871
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 108223302
chr16 88825512 88827616 ZNF143 GTRD no Epithelial (MCF-7) 21736872
chr16 88825512 88827616 ZNF143 GTRD no Epithelial (MCF-7) 108223303
chr16 88825532 88829851 POLR2A UCSC Txn Factor no Conserved 108223304
chr16 88825564 88827599 ZNF143 GTRD no Epithelial (MCF-7) 21736873
chr16 88825564 88827599 ZNF143 GTRD no Epithelial (MCF-7) 108223305
chr16 88825575 88827571 ZNF143 GTRD no Epithelial (MCF-7) 21736874
chr16 88825575 88827571 ZNF143 GTRD no Epithelial (MCF-7) 108223306
chr16 88825699 88826980 AR GTRD no Prostate (PC-3) 21736875
chr16 88825699 88826980 AR GTRD no Prostate (PC-3) 108223307
chr16 88825872 88826971 ZBTB33 GTRD no Lung (A549) 108223308
chr16 88826050 88827078 TCF7L2 GTRD no Colon (HCT116) 21736876
chr16 88826050 88827078 TCF7L2 GTRD no Colon (HCT116) 108223309
chr16 88826082 88827181 TCF7L2 GTRD no Colon (HCT116) 21736877
chr16 88826082 88827181 TCF7L2 GTRD no Colon (HCT116) 108223310
chr16 88826511 88827604 ZNF143 GTRD no Epithelial (MCF-7) 21736878
chr16 88826511 88827604 ZNF143 GTRD no Epithelial (MCF-7) 108223311
chr16 88826534 88827656 TCF7L2 GTRD no Colon (HCT116) 21736879
chr16 88826534 88827656 TCF7L2 GTRD no Colon (HCT116) 108223312
chr16 88826586 88827567 ZNF143 GTRD no Epithelial (MCF-7) 21736880
chr16 88826586 88827567 ZNF143 GTRD no Epithelial (MCF-7) 108223313
chr16 88826736 88826996 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21736881
chr16 88826736 88826996 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108223314
chr16 88826742 88827032 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21736882
chr16 88826742 88827032 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108223315
chr16 88826854 88827455 ZNF143 GTRD no Epithelial (MCF-7) 21736883
chr16 88826854 88827455 ZNF143 GTRD no Epithelial (MCF-7) 108223316
chr16 88826892 88827418 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21736884
chr16 88826892 88827418 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108223317
chr16 88826892 88827420 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21736885
chr16 88826892 88827420 E2F1 UCSC Txn Factor no Conserved 108223318
chr16 88826892 88827420 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108223319
chr16 88826900 88826906 SOX10 JASPAR yes 12300819
Genes associated with rs75475847[chr16:88826905], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More