EnhancerDB
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  3. rs7552411[chr1:173385303]
Enhancers that have rs7552411[chr1:173385303]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs7552411[chr1:173385303]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173384760 173385356 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846728
chr1 173384969 173385503 ZNF274 GTRD no Liver (HepG2) 21351293
chr1 173385021 173385481 ZNF274 GTRD no Liver (HepG2) 21351294
chr1 173385292 173385312 RREB1 JASPAR yes 33197454
chr1 173385300 173385305 SP1 TRANSFAC yes 33197455
Genes associated with rs7552411[chr1:173385303], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More