EnhancerDB
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  3. rs7552908[chr1:168439292]
Enhancers that have rs7552908[chr1:168439292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs7552908[chr1:168439292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168438482 168440518 ZNF274 GTRD no Bone Marrow (K562) 21348094
chr1 168438482 168440518 ZNF274 GTRD no Bone Marrow (K562) 107844722
chr1 168438791 168439435 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348103
chr1 168438856 168439392 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348104
chr1 168438859 168439375 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348106
chr1 168438867 168439363 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348107
chr1 168438872 168439308 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348108
chr1 168438873 168439337 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21348109
chr1 168438875 168439331 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348110
chr1 168438877 168439427 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348111
chr1 168438904 168439304 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348114
chr1 168438913 168439353 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348117
chr1 168438916 168439332 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348118
chr1 168438918 168439308 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348119
chr1 168438943 168439313 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348122
chr1 168438954 168439293 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348126
chr1 168438959 168439319 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348128
chr1 168438961 168439317 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348130
chr1 168438990 168439300 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348135
chr1 168439014 168439324 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21348144
chr1 168439134 168440311 AR GTRD no Prostate (PC-3) 21348153
chr1 168439146 168440696 ZBTB33 GTRD no Lung (A549) 21348154
chr1 168439146 168440696 ZBTB33 GTRD no Lung (A549) 107844723
chr1 168439216 168440540 ZBTB33 GTRD no Lung (A549) 21348155
chr1 168439216 168440540 ZBTB33 GTRD no Lung (A549) 107844724
chr1 168439249 168440658 ZNF274 GTRD no Bone Marrow (K562) 21348156
chr1 168439249 168440658 ZNF274 GTRD no Bone Marrow (K562) 107844725
chr1 168439286 168440437 ZNF274 GTRD no Cervix (HeLa-S3) 107844726
chr1 168439291 168439302 TBX20 JASPAR yes 32928198
Genes associated with rs7552908[chr1:168439292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More