EnhancerDB
  1. Home
  2. SNP
  3. rs7553034[chr1:19800632]
Enhancers that have rs7553034[chr1:19800632]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7553034[chr1:19800632]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19800626 19800642 T JASPAR yes 27195601
chr1 19800627 19800637 CLOCK JASPAR yes 27195602
chr1 19800627 19800637 HEY1 JASPAR yes 27195603
chr1 19800629 19800634 MYC TRANSFAC yes 27195604
chr1 19800629 19800634 USF1 TRANSFAC yes 27195605
chr1 19800629 19800634 USF2 TRANSFAC yes 27195606
Genes associated with rs7553034[chr1:19800632], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More