EnhancerDB
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Enhancers that have rs7553796[chr1:154404406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 154404273 154404562 vista3377
VISTA
Transcript factors that have rs7553796[chr1:154404406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154404035 154404439 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340447
chr1 154404035 154404439 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832617
chr1 154404046 154404430 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340449
chr1 154404046 154404430 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832619
chr1 154404048 154404448 FOS UCSC Txn Factor no Conserved 107832620
chr1 154404055 154404451 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107832621
chr1 154404061 154404517 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107832622
chr1 154404081 154404411 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107832623
chr1 154404097 154404417 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340451
chr1 154404097 154404417 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832626
chr1 154404124 154411940 ZNF274 GTRD no Blood (GM12878) 21340452
chr1 154404124 154411940 ZNF274 GTRD no Blood (GM12878) 107832628
chr1 154404124 154411940 ZNF274 GTRD no Blood (GM12878) 107832629
chr1 154404124 154411940 ZNF274 GTRD no Blood (GM12878) 107832630
chr1 154404129 154404493 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107832631
chr1 154404154 154407182 TEF1 GTRD no Bone (Osteoblast) 21340453
chr1 154404154 154407182 TEF1 GTRD no Bone (Osteoblast) 107832634
chr1 154404154 154407182 TEF1 GTRD no Bone (Osteoblast) 107832635
chr1 154404154 154407182 TEF1 GTRD no Bone (Osteoblast) 107832636
chr1 154404177 154404457 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107832637
chr1 154404189 154404419 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107832638
chr1 154404287 154407186 ZBTB33 GTRD no Lung (A549) 21340454
chr1 154404287 154407186 ZBTB33 GTRD no Lung (A549) 107832639
chr1 154404287 154407186 ZBTB33 GTRD no Lung (A549) 107832640
chr1 154404287 154407186 ZBTB33 GTRD no Lung (A549) 107832641
chr1 154404289 154407988 ZNF274 GTRD no Blood (GM12878) 21340455
chr1 154404289 154407988 ZNF274 GTRD no Blood (GM12878) 107832642
chr1 154404289 154407988 ZNF274 GTRD no Blood (GM12878) 107832643
chr1 154404289 154407988 ZNF274 GTRD no Blood (GM12878) 107832644
chr1 154404321 154405453 ZNF274 GTRD no Blood (GM12878) 21340456
chr1 154404321 154405453 ZNF274 GTRD no Blood (GM12878) 107832645
chr1 154404321 154405453 ZNF274 GTRD no Blood (GM12878) 107832646
chr1 154404338 154407001 ZNF143 GTRD no Epithelial (MCF-7) 21340457
chr1 154404338 154407001 ZNF143 GTRD no Epithelial (MCF-7) 107832647
chr1 154404338 154407001 ZNF143 GTRD no Epithelial (MCF-7) 107832648
chr1 154404338 154407001 ZNF143 GTRD no Epithelial (MCF-7) 107832649
chr1 154404343 154407743 ZNF274 GTRD no Cervix (HeLa-S3) 21340458
chr1 154404343 154407743 ZNF274 GTRD no Cervix (HeLa-S3) 107832650
chr1 154404343 154407743 ZNF274 GTRD no Cervix (HeLa-S3) 107832651
chr1 154404343 154407743 ZNF274 GTRD no Cervix (HeLa-S3) 107832652
chr1 154404353 154404799 ZNF274 GTRD no Liver (HepG2) 21340459
chr1 154404353 154404799 ZNF274 GTRD no Liver (HepG2) 107832653
chr1 154404381 154406220 ZNF274 GTRD no Bone Marrow (K562) 107832654
chr1 154404381 154406220 ZNF274 GTRD no Bone Marrow (K562) 107832655
chr1 154404381 154406220 ZNF274 GTRD no Bone Marrow (K562) 107832656
chr1 154404395 154404411 POU4F2 JASPAR yes 32292277
chr1 154404395 154404411 POU4F3 JASPAR yes 32292278
chr1 154404395 154404411 POU4F2 JASPAR yes 118373003
chr1 154404395 154404411 POU4F3 JASPAR yes 118373004
chr1 154404395 154404487 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21340460
chr1 154404395 154404487 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107832657
chr1 154404396 154404411 MEF2A JASPAR yes 32292279
chr1 154404396 154404411 MEF2A JASPAR yes 118373005
chr1 154404397 154404411 POU4F1 JASPAR yes 32292280
chr1 154404397 154404411 POU4F1 JASPAR yes 118373006
chr1 154404397 154404412 MEF2C JASPAR yes 32292281
chr1 154404397 154404412 MEF2C JASPAR yes 118373007
chr1 154404398 154404410 MEF2A JASPAR yes 32292282
chr1 154404398 154404410 MEF2B JASPAR yes 32292283
chr1 154404398 154404410 MEF2D JASPAR yes 32292284
chr1 154404398 154404410 MEF2A JASPAR yes 118373008
chr1 154404398 154404410 MEF2B JASPAR yes 118373009
chr1 154404398 154404410 MEF2D JASPAR yes 118373010
chr1 154404399 154404409 MEF2A JASPAR yes 32292285
chr1 154404399 154404409 MEF2A JASPAR yes 118373011
chr1 154404404 154406695 ZNF143 GTRD no Epithelial (MCF-7) 21340461
chr1 154404404 154406695 ZNF143 GTRD no Epithelial (MCF-7) 107832658
chr1 154404404 154406695 ZNF143 GTRD no Epithelial (MCF-7) 107832659
chr1 154404404 154406695 ZNF143 GTRD no Epithelial (MCF-7) 107832660
chr1 154404405 154404415 TEAD4 JASPAR yes 32292287
chr1 154404405 154404415 TEAD4 JASPAR yes 118373013
chr1 154404406 154404416 RELA JASPAR yes 32292288
chr1 154404406 154404416 REL JASPAR yes 32292289
chr1 154404406 154404416 RELA JASPAR yes 118373014
chr1 154404406 154404416 REL JASPAR yes 118373015
chr1 154404406 154404417 NFKB1 JASPAR yes 32292290
chr1 154404406 154404417 NFKB1 JASPAR yes 118373016
Genes associated with rs7553796[chr1:154404406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More