EnhancerDB
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  3. rs7555609[chr1:39588967]
Enhancers that have rs7555609[chr1:39588967]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7555609[chr1:39588967]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39588963 39588967 NFE TRANSFAC yes 28254289
chr1 39588963 39588968 GATA1 TRANSFAC yes 28254290
chr1 39588963 39588969 GATA3 JASPAR yes 28254291
Genes associated with rs7555609[chr1:39588967], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More