EnhancerDB
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  3. rs7556003[chr1:173389048]
Enhancers that have rs7556003[chr1:173389048]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs7556003[chr1:173389048]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173389028 173389048 RREB1 JASPAR yes 33197896
chr1 173389030 173389050 RREB1 JASPAR yes 33197897
chr1 173389033 173389053 RREB1 JASPAR yes 33197898
chr1 173389038 173389059 ZNF263 JASPAR yes 33197899
chr1 173389041 173389051 SP1 JASPAR yes 33197902
chr1 173389042 173389052 ZNF740 JASPAR yes 33197903
chr1 173389043 173389053 SP1 JASPAR yes 33197904
chr1 173389043 173389053 ZNF740 JASPAR yes 33197905
chr1 173389044 173389054 SP1 JASPAR yes 33197906
chr1 173389044 173389054 ZNF740 JASPAR yes 33197907
chr1 173389045 173389055 SP1 JASPAR yes 33197908
chr1 173389045 173389055 ZNF740 JASPAR yes 33197909
chr1 173389046 173389056 ZNF740 JASPAR yes 33197910
Genes associated with rs7556003[chr1:173389048], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More