EnhancerDB
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  3. rs75586214[chr17:55988610]
Enhancers that have rs75586214[chr17:55988610]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs75586214[chr17:55988610]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55988604 55988616 GLI2 JASPAR yes 54998117
chr17 55988608 55988616 TBX5 JASPAR yes 54998118
chr17 55988608 55988617 ZEB1 JASPAR yes 54998119
chr17 55988608 55988620 PKNOX2 JASPAR yes 54998120
chr17 55988608 55988621 ZBTB18 JASPAR yes 54998121
chr17 55988609 55988619 FIGLA JASPAR yes 54998122
chr17 55988609 55988619 ID4 JASPAR yes 54998123
chr17 55988609 55988619 TCF3 JASPAR yes 54998124
chr17 55988609 55988619 TCF4 JASPAR yes 54998125
chr17 55988610 55988619 SNAI2 JASPAR yes 54998126
Genes associated with rs75586214[chr17:55988610], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More