EnhancerDB
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  3. rs75713516[chr1:1779176]
Enhancers that have rs75713516[chr1:1779176]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs75713516[chr1:1779176]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1779168 1779178 HOXC10 JASPAR yes 26206277
chr1 1779168 1779178 HOXD11 JASPAR yes 26206278
chr1 1779168 1779179 HOXC11 JASPAR yes 26206279
chr1 1779168 1779179 HOXC12 JASPAR yes 26206280
chr1 1779168 1779179 HOXC13 JASPAR yes 26206281
chr1 1779168 1779179 HOXD12 JASPAR yes 26206282
Genes associated with rs75713516[chr1:1779176], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More