EnhancerDB
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  3. rs75946049[chr12:125179779]
Enhancers that have rs75946049[chr12:125179779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 125179424 125179850 vista15320
VISTA
Transcript factors that have rs75946049[chr12:125179779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125179298 125179846 GATA2 UCSC Txn Factor no Conserved 108069448
chr12 125179320 125179796 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581777
chr12 125179320 125179796 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069449
chr12 125179354 125179858 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581780
chr12 125179354 125179858 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069452
chr12 125179423 125179783 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581788
chr12 125179423 125179783 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069460
chr12 125179467 125179843 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581789
chr12 125179467 125179843 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069461
chr12 125179486 125179856 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581790
chr12 125179486 125179856 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069462
chr12 125179530 125179886 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581791
chr12 125179530 125179886 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069463
chr12 125179544 125179794 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581792
chr12 125179544 125179794 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069464
chr12 125179558 125179818 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581794
chr12 125179558 125179818 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069466
chr12 125179764 125179779 HNF1A JASPAR yes 82497276
chr12 125179764 125179779 HNF1A JASPAR yes 124409890
chr12 125179769 125179779 HMBOX1 JASPAR yes 82497322
chr12 125179769 125179779 HMBOX1 JASPAR yes 124409936
Genes associated with rs75946049[chr12:125179779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More