EnhancerDB
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  3. rs75947349[chr1:19786019]
Enhancers that have rs75947349[chr1:19786019]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs75947349[chr1:19786019]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19786013 19786021 TBX5 JASPAR yes 27193335
chr1 19786013 19786022 ZEB1 JASPAR yes 27193336
chr1 19786014 19786024 ID4 JASPAR yes 27193337
chr1 19786014 19786024 TCF3 JASPAR yes 27193338
chr1 19786014 19786024 TCF4 JASPAR yes 27193339
chr1 19786016 19786021 USF2 TRANSFAC yes 27193340
Genes associated with rs75947349[chr1:19786019], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More