EnhancerDB
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  3. rs76071768[chr19:13140996]
Enhancers that have rs76071768[chr19:13140996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13138760 13157647 enh17929
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 13140737 13141121 vista28677
VISTA
Transcript factors that have rs76071768[chr19:13140996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13139579 13141042 TCF7L2 GTRD no Colon (HCT116) 21850169
chr19 13139579 13141042 TCF7L2 GTRD no Colon (HCT116) 108387482
chr19 13139783 13141220 TCF7L2 GTRD no Colon (HCT116) 21850170
chr19 13139783 13141220 TCF7L2 GTRD no Colon (HCT116) 108387483
chr19 13139832 13141115 TCF7L2 GTRD no Colon (HCT116) 21850171
chr19 13139832 13141115 TCF7L2 GTRD no Colon (HCT116) 108387484
chr19 13140536 13141171 TCF7L2 GTRD no Colon (HCT116) 21850174
chr19 13140536 13141171 TCF7L2 GTRD no Colon (HCT116) 108387487
chr19 13140722 13141374 CTCF UCSC Txn Factor no Conserved 108387488
chr19 13140766 13141126 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108387489
chr19 13140802 13141052 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108387490
chr19 13140804 13141084 RAD21 UCSC Txn Factor no Conserved 108387491
chr19 13140810 13141040 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850175
chr19 13140810 13141040 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108387492
chr19 13140810 13141100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108387493
chr19 13140811 13141101 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108387494
chr19 13140814 13141084 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108387495
chr19 13140816 13141106 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21850176
chr19 13140816 13141106 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108387496
chr19 13140823 13141053 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21850177
chr19 13140823 13141053 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108387497
chr19 13140825 13141085 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850178
chr19 13140825 13141085 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108387498
chr19 13140830 13141074 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108387499
chr19 13140834 13141078 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108387500
chr19 13140857 13141033 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21850179
chr19 13140857 13141033 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108387501
chr19 13140857 13141047 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108387502
chr19 13140881 13141019 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108387503
chr19 13140886 13141011 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850180
chr19 13140886 13141011 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108387504
chr19 13140903 13141005 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108387505
chr19 13140944 13141002 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21850181
chr19 13140944 13141002 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108387506
chr19 13140989 13141003 PAX6 JASPAR yes 70807788
chr19 13140989 13141003 PAX6 JASPAR yes 112502534
chr19 13140995 13141010 MEF2C JASPAR yes 70807789
chr19 13140995 13141010 MEF2C JASPAR yes 112502535
chr19 13140996 13141011 MEF2A JASPAR yes 70807790
chr19 13140996 13141011 MEF2A JASPAR yes 112502536
Genes associated with rs76071768[chr19:13140996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More