EnhancerDB
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  3. rs76374280[chr1:90374623]
Enhancers that have rs76374280[chr1:90374623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90347765 90388035 enh484
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 90374317 90375036 vista2407
VISTA
Transcript factors that have rs76374280[chr1:90374623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90374334 90374985 POLR2A UCSC Txn Factor no Conserved 107813845
chr1 90374437 90375087 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107813846
chr1 90374451 90374695 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107813847
chr1 90374457 90375007 GATA2 UCSC Txn Factor no Conserved 107813848
chr1 90374457 90375007 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107813849
chr1 90374507 90374843 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107813850
chr1 90374532 90374988 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107813851
chr1 90374560 90375100 EP300 UCSC Txn Factor no Conserved 107813852
chr1 90374560 90375100 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107813853
chr1 90374573 90375089 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107813854
chr1 90374577 90375107 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107813855
chr1 90374622 90374638 ZNF143 JASPAR yes 30633223
chr1 90374622 90374638 ZNF143 JASPAR yes 118326354
Genes associated with rs76374280[chr1:90374623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More