EnhancerDB
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  3. rs76419002[chr19:11252721]
Enhancers that have rs76419002[chr19:11252721]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11246465 11256159 enh17922
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
chr19 11251931 11254703 vista790
VISTA
Transcript factors that have rs76419002[chr19:11252721]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11252021 11254530 ZNF143 GTRD no Epithelial (MCF-7) 21849614
chr19 11252021 11254530 ZNF143 GTRD no Epithelial (MCF-7) 107690072
chr19 11252021 11254530 ZNF143 GTRD no Epithelial (MCF-7) 108384626
chr19 11252021 11254530 ZNF143 GTRD no Epithelial (MCF-7) 108384627
chr19 11252023 11253677 ZNF143 GTRD no Epithelial (MCF-7) 21849615
chr19 11252023 11253677 ZNF143 GTRD no Epithelial (MCF-7) 107690073
chr19 11252023 11253677 ZNF143 GTRD no Epithelial (MCF-7) 108384628
chr19 11252571 11254390 POLR2A UCSC Txn Factor no Conserved 107690074
chr19 11252571 11254390 POLR2A UCSC Txn Factor no Conserved 108384629
chr19 11252571 11254390 POLR2A UCSC Txn Factor no Conserved 108384630
chr19 11252595 11253268 CTCF UCSC Txn Factor no Conserved 107690075
chr19 11252595 11253268 CTCF UCSC Txn Factor no Conserved 108384631
chr19 11252616 11254406 TCF7L2 GTRD no Colon (HCT116) 107690076
chr19 11252616 11254406 TCF7L2 GTRD no Colon (HCT116) 108384632
chr19 11252616 11254406 TCF7L2 GTRD no Colon (HCT116) 108384633
chr19 11252629 11253678 ZNF143 GTRD no Epithelial (MCF-7) 21849616
chr19 11252629 11253678 ZNF143 GTRD no Epithelial (MCF-7) 107690077
chr19 11252629 11253678 ZNF143 GTRD no Epithelial (MCF-7) 108384634
chr19 11252648 11253274 TCF7L2 GTRD no Colon (HCT116) 107690078
chr19 11252648 11253274 TCF7L2 GTRD no Colon (HCT116) 108384635
chr19 11252711 11252726 RFX5 JASPAR yes 108571514
chr19 11252711 11252726 RFX5 JASPAR yes 112457870
chr19 11252714 11252729 TFAP2A JASPAR yes 108571515
chr19 11252714 11252729 TFAP2C JASPAR yes 108571516
chr19 11252714 11252729 TFAP2A JASPAR yes 112457871
chr19 11252714 11252729 TFAP2C JASPAR yes 112457872
chr19 11252717 11252729 TFAP2C JASPAR yes 108571517
chr19 11252717 11252729 TFAP2C JASPAR yes 112457873
Genes associated with rs76419002[chr19:11252721], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More