EnhancerDB
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  3. rs7643775[chr3:58039417]
Enhancers that have rs7643775[chr3:58039417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7643775[chr3:58039417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58039403 58039417 GATA2 JASPAR yes 2670091
chr3 58039413 58039426 NR2F1 JASPAR yes 2670093
chr3 58039415 58039426 ESRRA JASPAR yes 2670094
chr3 58039415 58039426 ESRRB JASPAR yes 2670095
chr3 58039416 58039424 NR4A2 JASPAR yes 2670096
chr3 58039417 58039427 RORA JASPAR yes 2670097
Genes associated with rs7643775[chr3:58039417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More