EnhancerDB
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Enhancers that have rs76550968[chr17:41519578]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs76550968[chr17:41519578]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41517754 41520458 P63 GTRD no Skin (Keratinocyte) 21760255
chr17 41518601 41520589 ZNF274 GTRD no Cervix (HeLa-S3) 21760261
chr17 41518675 41520523 ZNF274 GTRD no Cervix (HeLa-S3) 21760263
chr17 41518717 41520290 P63 GTRD no Skin (Keratinocyte) 21760264
chr17 41518767 41523144 ZNF274 GTRD no Cervix (HeLa-S3) 21760266
chr17 41518772 41519907 ZNF274 GTRD no Cervix (HeLa-S3) 21760267
chr17 41518773 41519853 ZNF274 GTRD no Cervix (HeLa-S3) 21760268
chr17 41518888 41520332 ZNF143 GTRD no Epithelial (MCF-7) 21760274
chr17 41518935 41523274 ZNF143 GTRD no Epithelial (MCF-7) 21760279
chr17 41519067 41520375 ZNF143 GTRD no Epithelial (MCF-7) 21760285
chr17 41519071 41520210 ZNF143 GTRD no Epithelial (MCF-7) 21760286
chr17 41519075 41519693 ZBTB33 GTRD no Lung (A549) 21760287
chr17 41519090 41520229 ZNF143 GTRD no Epithelial (MCF-7) 21760288
chr17 41519113 41520233 ZNF143 GTRD no Epithelial (MCF-7) 21760289
chr17 41519134 41519898 ZBTB33 GTRD no Lung (A549) 21760290
chr17 41519231 41520212 P63 GTRD no Skin (Keratinocyte) 21760291
chr17 41519241 41520285 P63 GTRD no Skin (Keratinocyte) 21760292
chr17 41519281 41523404 ZNF143 GTRD no Epithelial (MCF-7) 21760293
chr17 41519330 41520299 ZNF143 GTRD no Epithelial (MCF-7) 21760294
chr17 41519456 41520215 ZNF143 GTRD no Epithelial (MCF-7) 21760295
chr17 41519576 41519590 PLAG1 JASPAR yes 54346829
Genes associated with rs76550968[chr17:41519578], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More