EnhancerDB
  1. Home
  2. SNP
  3. rs76562462[chr5:172227186]
Enhancers that have rs76562462[chr5:172227186]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172226784 172227709 vista50176
VISTA
Transcript factors that have rs76562462[chr5:172227186]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172226947 172227615 STAT3 UCSC Txn Factor no Conserved 108537512
chr5 172227174 172227195 REST JASPAR yes 67828825
chr5 172227174 172227195 REST JASPAR yes 70763547
chr5 172227177 172227528 FOS UCSC Txn Factor no Conserved 108537513
Genes associated with rs76562462[chr5:172227186], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More