EnhancerDB
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  3. rs76565028[chr5:79480460]
Enhancers that have rs76565028[chr5:79480460]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr5 79480253 79480678 vista48209
VISTA
Transcript factors that have rs76565028[chr5:79480460]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79480171 79480677 FOXA1 UCSC Txn Factor no Conserved 108535539
chr5 79480174 79480656 FOXA2 UCSC Txn Factor no Conserved 108535540
chr5 79480450 79480461 RUNX1 JASPAR yes 63703206
chr5 79480450 79480461 RUNX1 JASPAR yes 70671424
chr5 79480456 79480464 FOXC1 JASPAR yes 63703207
chr5 79480456 79480464 FOXC1 JASPAR yes 70671425
chr5 79480458 79480465 NKX3-1 JASPAR yes 63703208
chr5 79480458 79480465 NKX3-1 JASPAR yes 70671426
chr5 79480458 79480473 MEF2A JASPAR yes 63703209
chr5 79480458 79480473 MEF2A JASPAR yes 70671427
chr5 79480459 79480474 MEF2C JASPAR yes 63703210
chr5 79480459 79480474 MEF2C JASPAR yes 70671428
Genes associated with rs76565028[chr5:79480460], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More