EnhancerDB
  1. Home
  2. SNP
  3. rs76573939[chr1:227541999]
Enhancers that have rs76573939[chr1:227541999]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 227541685 227548089 enh12732
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Astrocyte Lung (A549) Stomach Placenta Adrenal Uterus Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs76573939[chr1:227541999]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227541529 227542065 ZNF274 GTRD no Bone Marrow (K562) 21387788
chr1 227541579 227543218 ZNF143 GTRD no Epithelial (MCF-7) 21387789
chr1 227541717 227543196 ZNF274 GTRD no Bone Marrow (K562) 21387790
chr1 227541781 227543359 ZNF143 GTRD no Epithelial (MCF-7) 21387791
chr1 227541805 227543233 ZBTB33 GTRD no Lung (A549) 21387792
chr1 227541874 227543304 ZBTB33 GTRD no Lung (A549) 21387793
chr1 227541977 227543016 ZNF143 GTRD no Epithelial (MCF-7) 21387794
chr1 227541997 227543096 ZNF143 GTRD no Epithelial (MCF-7) 21387795
Genes associated with rs76573939[chr1:227541999], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 228294380 228297013 - MRPL55 ENSG00000162910.14 228297013 752381 Stomach 0.273703 1914