EnhancerDB
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  3. rs76675079[chr1:19799828]
Enhancers that have rs76675079[chr1:19799828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs76675079[chr1:19799828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19799818 19799830 YY1 JASPAR yes 27195466
chr1 19799824 19799844 TP53 JASPAR yes 27195467
chr1 19799825 19799842 RARA JASPAR yes 27195468
chr1 19799826 19799830 LFA1 TRANSFAC yes 27195469
Genes associated with rs76675079[chr1:19799828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More