EnhancerDB
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  3. rs76846478[chr5:77888195]
Enhancers that have rs76846478[chr5:77888195]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77878525 77914000 enh48956
Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 77888034 77888302 vista48161
VISTA
Transcript factors that have rs76846478[chr5:77888195]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77888177 77888395 RUNX3 UCSC Txn Factor no Conserved 108535486
chr5 77888179 77888198 CTCF JASPAR yes 63603611
chr5 77888179 77888198 CTCF JASPAR yes 70669520
Genes associated with rs76846478[chr5:77888195], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More