EnhancerDB
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  3. rs76879369[chr12:116976368]
Enhancers that have rs76879369[chr12:116976368]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs76879369[chr12:116976368]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116975558 116976448 TEF1 GTRD no Bone (Osteoblast) 21577320
chr12 116975884 116976474 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577331
chr12 116975934 116976429 ZBTB33 GTRD no Brain (SK-N-SH) 21577340
chr12 116975976 116976386 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577343
chr12 116976048 116976484 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577345
chr12 116976366 116976376 SREBF2 JASPAR yes 124008731
Genes associated with rs76879369[chr12:116976368], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More