EnhancerDB
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  3. rs77162488[chr1:23455454]
Enhancers that have rs77162488[chr1:23455454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs77162488[chr1:23455454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23455450 23455464 ONECUT1 JASPAR yes 27416364
chr1 23455450 23455464 ONECUT2 JASPAR yes 27416365
chr1 23455450 23455464 ONECUT3 JASPAR yes 27416366
chr1 23455451 23455461 CUX1 JASPAR yes 27416367
chr1 23455451 23455461 CUX2 JASPAR yes 27416368
chr1 23455453 23455463 LHX6 JASPAR yes 27416369
Genes associated with rs77162488[chr1:23455454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More