EnhancerDB
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  3. rs77186489[chr1:229366909]
Enhancers that have rs77186489[chr1:229366909]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs77186489[chr1:229366909]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229366903 229366918 PRDM1 JASPAR yes 35977754
chr1 229366905 229366926 IRF1 JASPAR yes 35977755
chr1 229366906 229366911 ETS2 TRANSFAC yes 35977756
chr1 229366909 229366923 STAT1 JASPAR yes 35977757
chr1 229366909 229366924 PRDM1 JASPAR yes 35977758
chr1 229366909 229366924 STAT2 JASPAR yes 35977759
chr1 229366909 229366927 IRF2 JASPAR yes 35977760
Genes associated with rs77186489[chr1:229366909], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More